Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. MHTC-1 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
968631 bp
Thymine Count
969319 bp
Guanine Count
1978850 bp
Cytosine Count
1966842 bp
Genome Length
5892341 bp
Protein-coding Genes
5482 genes
Non-Coding Genes
49 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| marr family transcriptional regulator | EJI01_09005 | Not Available | Positive | 1836783 - 1837310 | 19690.4 |
| efflux transporter outer membrane subunit | EJI01_09010 | Not Available | Positive | 1837294 - 1838763 | 51342.8 |
| hlyd family efflux transporter periplasmic adaptor subunit | EJI01_09015 | Not Available | Positive | 1838778 - 1840082 | 45552.2 |
| dha2 family efflux mfs transporter permease subunit | EJI01_09020 | Not Available | Positive | 1840100 - 1841662 | 55675.8 |
| abc transporter atp-binding protein | EJI01_09025 | Not Available | Positive | 1841918 - 1842688 | 27963.9 |
| abc transporter atp-binding protein | EJI01_09030 | Not Available | Positive | 1842690 - 1843397 | 25493.3 |
| abc transporter substrate-binding protein | EJI01_09035 | Not Available | Positive | 1843443 - 1844639 | 42307.8 |
| branched-chain amino acid abc transporter permease | EJI01_09040 | Not Available | Positive | 1844717 - 1845592 | 31092.5 |
| branched-chain amino acid abc transporter permease | EJI01_09045 | Not Available | Positive | 1845589 - 1846575 | 35139.2 |
| smp-30/gluconolactonase/lre family protein | EJI01_09050 | Not Available | Positive | 1846584 - 1847513 | 34609.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
