Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. MHTC-1 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
968631 bp
Thymine Count
969319 bp
Guanine Count
1978850 bp
Cytosine Count
1966842 bp
Genome Length
5892341 bp
Protein-coding Genes
5482 genes
Non-Coding Genes
49 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| nadh-quinone oxidoreductase subunit nuoi | EJI01_08955 | Not Available | Positive | 1826759 - 1827277 | 19497.4 |
| nadh-quinone oxidoreductase subunit j | EJI01_08960 | Not Available | Positive | 1827317 - 1827964 | 23373.4 |
| nadh-quinone oxidoreductase subunit nuok | EJI01_08965 | Not Available | Positive | 1827961 - 1828269 | 11178.3 |
| nadh-quinone oxidoreductase subunit l | EJI01_08970 | Not Available | Positive | 1828279 - 1830315 | 74799.3 |
| nadh-quinone oxidoreductase subunit m | EJI01_08975 | Not Available | Positive | 1830343 - 1831818 | 53531.6 |
| nadh-quinone oxidoreductase subunit nuon | EJI01_08980 | Not Available | Positive | 1831930 - 1833417 | 52705.2 |
| duf2818 family protein | EJI01_08985 | Not Available | Positive | 1833430 - 1833735 | 11138.9 |
| nudix hydrolase | EJI01_08990 | Not Available | Positive | 1833737 - 1834327 | 21679.6 |
| duf1178 family protein | EJI01_08995 | Not Available | Positive | 1834338 - 1834781 | 15871.9 |
| atp-binding cassette domain-containing protein | EJI01_09000 | Not Available | Negative | 1834921 - 1836705 | 62982.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
