Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. MHTC-1 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
968631 bp
Thymine Count
969319 bp
Guanine Count
1978850 bp
Cytosine Count
1966842 bp
Genome Length
5892341 bp
Protein-coding Genes
5482 genes
Non-Coding Genes
49 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| antar domain-containing protein | EJI01_08855 | Not Available | Negative | 1807059 - 1808357 | 47686.9 |
| trna (adenosine(37)-n6)-threonylcarbamoyltransferase complex transferase subunit tsad | EJI01_08860 | Not Available | Positive | 1808442 - 1809494 | 36489.4 |
| alpha/beta hydrolase | EJI01_08865 | Not Available | Negative | 1809439 - 1810182 | 27256.8 |
| hsp20/alpha crystallin family protein | EJI01_08870 | Not Available | Negative | 1810390 - 1810761 | 13744.4 |
| branched-chain amino acid abc transporter substrate-binding protein | EJI01_08875 | Not Available | Positive | 1810885 - 1812171 | 46594.9 |
| pyridoxal phosphate-dependent aminotransferase | EJI01_08880 | Not Available | Positive | 1812191 - 1813348 | 41723.4 |
| 30s ribosomal protein s15 | EJI01_08885 | Not Available | Positive | 1813552 - 1813818 | 9889.12 |
| polyribonucleotide nucleotidyltransferase | EJI01_08890 | Not Available | Positive | 1814024 - 1816315 | 82951.6 |
| nad(p)h-quinone oxidoreductase | EJI01_08895 | Not Available | Positive | 1816394 - 1817392 | 34620.8 |
| triose-phosphate isomerase | EJI01_08900 | Not Available | Positive | 1817404 - 1818156 | 25717.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
