Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. MHTC-1 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
968631 bp
Thymine Count
969319 bp
Guanine Count
1978850 bp
Cytosine Count
1966842 bp
Genome Length
5892341 bp
Protein-coding Genes
5482 genes
Non-Coding Genes
49 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| metalloprotease pmba | EJI01_08750 | Not Available | Positive | 1783885 - 1785255 | 48142.6 |
| alpha/beta hydrolase | EJI01_08755 | Not Available | Negative | 1785271 - 1785999 | 26880.2 |
| helix-turn-helix domain-containing protein | EJI01_08760 | Not Available | Negative | 1786091 - 1787047 | 34993.7 |
| nudix domain-containing protein | EJI01_08770 | Not Available | Negative | 1787540 - 1788022 | 17693.2 |
| gatb/yqey domain-containing protein | EJI01_08775 | Not Available | Negative | 1788019 - 1788468 | 15870.4 |
| 30s ribosomal protein s21 | EJI01_08780 | Not Available | Negative | 1788567 - 1788779 | 8506.61 |
| nad(p)/fad-dependent oxidoreductase | EJI01_08785 | Not Available | Negative | 1788890 - 1790092 | 42939.4 |
| sterol desaturase family protein | EJI01_08790 | Not Available | Negative | 1790152 - 1791282 | 42797.4 |
| uroporphyrinogen-iii c-methyltransferase | EJI01_08795 | Not Available | Negative | 1791362 - 1792159 | 27638.5 |
| dna-binding protein ybib | EJI01_08800 | Not Available | Negative | 1792156 - 1793070 | 32329.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
