Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. MHTC-1 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
968631 bp
Thymine Count
969319 bp
Guanine Count
1978850 bp
Cytosine Count
1966842 bp
Genome Length
5892341 bp
Protein-coding Genes
5482 genes
Non-Coding Genes
49 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| type ii toxin-antitoxin system vapc family toxin | EJI01_08640 | Not Available | Negative | 1765186 - 1765584 | 14714.8 |
| abrb/maze/spovt family dna-binding domain-containing protein | EJI01_08645 | Not Available | Negative | 1765584 - 1765796 | 7864.47 |
| gdsl family lipase | EJI01_08650 | Not Available | Negative | 1765908 - 1766546 | 22026.4 |
| hypothetical protein | EJI01_08655 | Not Available | Negative | 1766628 - 1767143 | 19555.8 |
| siderophore-interacting protein | EJI01_08660 | Not Available | Negative | 1767256 - 1768095 | 30372.9 |
| padr family transcriptional regulator | EJI01_08670 | Not Available | Negative | 1768235 - 1768804 | 20580.8 |
| hypothetical protein | EJI01_08680 | Not Available | Positive | 1769321 - 1769611 | 10231.2 |
| twin-arginine translocation pathway signal protein | EJI01_08685 | Not Available | Negative | 1769764 - 1771080 | 48820.6 |
| abc transporter substrate-binding protein | EJI01_08690 | Not Available | Negative | 1771090 - 1772055 | 34195.7 |
| tripartite tricarboxylate transporter substrate binding protein | EJI01_08695 | Not Available | Negative | 1772070 - 1773053 | 35212.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
