Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. MHTC-1 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
968631 bp
Thymine Count
969319 bp
Guanine Count
1978850 bp
Cytosine Count
1966842 bp
Genome Length
5892341 bp
Protein-coding Genes
5482 genes
Non-Coding Genes
49 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| septation protein a | EJI01_00830 | Not Available | Negative | 172388 - 172927 | 20289.6 |
| peptide-methionine (r)-s-oxide reductase | EJI01_00835 | Not Available | Negative | 172950 - 173366 | 15142.8 |
| ydiu family protein | EJI01_00840 | Not Available | Negative | 173363 - 174844 | 54238.1 |
| fatty-acid--coa ligase | EJI01_00845 | Not Available | Positive | 175045 - 176688 | 60229.2 |
| branched-chain amino acid abc transporter substrate-binding protein | EJI01_00850 | Not Available | Positive | 176730 - 177974 | 45184.3 |
| branched-chain amino acid abc transporter substrate-binding protein | EJI01_00855 | Not Available | Positive | 178140 - 179378 | 45155.8 |
| branched-chain amino acid abc transporter permease | EJI01_00860 | Not Available | Positive | 179461 - 180414 | 33984.9 |
| branched-chain amino acid abc transporter permease | EJI01_00865 | Not Available | Positive | 180416 - 181777 | 48934.0 |
| abc transporter atp-binding protein | EJI01_00870 | Not Available | Positive | 181836 - 182621 | 28447.5 |
| abc transporter atp-binding protein | EJI01_00875 | Not Available | Positive | 182627 - 183322 | 25731.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
