Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. MHTC-1 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
968631 bp
Thymine Count
969319 bp
Guanine Count
1978850 bp
Cytosine Count
1966842 bp
Genome Length
5892341 bp
Protein-coding Genes
5482 genes
Non-Coding Genes
49 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| multidrug transporter subunit mdtc | EJI01_08585 | Not Available | Positive | 1747330 - 1750452 | 110643.0 |
| nodulation protein | EJI01_08590 | Not Available | Positive | 1751288 - 1754545 | 116144.0 |
| efflux transporter outer membrane subunit | EJI01_08595 | Not Available | Positive | 1754553 - 1755965 | 49461.1 |
| murr/rpir family transcriptional regulator | EJI01_08605 | Not Available | Negative | 1756603 - 1757472 | 31016.0 |
| aspartate aminotransferase family protein | EJI01_08610 | Not Available | Positive | 1757595 - 1758923 | 47240.8 |
| transporter substrate-binding domain-containing protein | EJI01_08615 | Not Available | Positive | 1758953 - 1759858 | 32977.8 |
| arylsulfatase | EJI01_08620 | Not Available | Positive | 1759868 - 1760509 | 22415.1 |
| undecaprenyl-diphosphate phosphatase | EJI01_08625 | Not Available | Positive | 1760563 - 1761387 | 29679.2 |
| peptidase | EJI01_08630 | Not Available | Negative | 1761692 - 1762531 | 31190.3 |
| dna mismatch repair protein muts | EJI01_08635 | Not Available | Negative | 1762556 - 1765189 | 95117.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
