Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. MHTC-1 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
968631 bp
Thymine Count
969319 bp
Guanine Count
1978850 bp
Cytosine Count
1966842 bp
Genome Length
5892341 bp
Protein-coding Genes
5482 genes
Non-Coding Genes
49 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| nuclear transport factor 2 family protein | EJI01_08475 | Not Available | Positive | 1727820 - 1728233 | 15475.3 |
| merr family transcriptional regulator | EJI01_08480 | Not Available | Positive | 1728223 - 1728678 | 17312.1 |
| hpf/raia family ribosome-associated protein | EJI01_08485 | Not Available | Negative | 1728688 - 1729044 | 13022.2 |
| branched-chain amino acid transferase | EJI01_08490 | Not Available | Positive | 1729153 - 1730061 | 32965.2 |
| outer membrane protein assembly factor bame | EJI01_08495 | Not Available | Negative | 1730063 - 1730653 | 21675.2 |
| acyltransferase | EJI01_08500 | Not Available | Negative | 1730687 - 1731859 | 43956.9 |
| lyttr family transcriptional regulator | EJI01_08505 | Not Available | Positive | 1732012 - 1732881 | 32963.9 |
| ribosome biogenesis gtpase ylqf | EJI01_08510 | Not Available | Positive | 1732929 - 1733876 | 34744.9 |
| antibiotic biosynthesis monooxygenase | EJI01_08515 | Not Available | Positive | 1734275 - 1734562 | 10333.6 |
| sgnh/gdsl hydrolase family protein | EJI01_08525 | Not Available | Negative | 1734993 - 1735700 | 25589.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
