Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. MHTC-1 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
968631 bp
Thymine Count
969319 bp
Guanine Count
1978850 bp
Cytosine Count
1966842 bp
Genome Length
5892341 bp
Protein-coding Genes
5482 genes
Non-Coding Genes
49 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf427 domain-containing protein | EJI01_08375 | Not Available | Positive | 1709520 - 1709801 | 10630.3 |
| hypothetical protein | EJI01_08380 | Not Available | Positive | 1709798 - 1710541 | 27522.5 |
| universal stress protein | EJI01_08385 | Not Available | Positive | 1710645 - 1711082 | 14940.1 |
| rlua family pseudouridine synthase | EJI01_08390 | Not Available | Negative | 1711260 - 1711904 | 24041.1 |
| mfs transporter | EJI01_08395 | Not Available | Positive | 1712006 - 1713187 | 41170.6 |
| 2fe-2s iron-sulfur cluster binding domain-containing protein | EJI01_08400 | Not Available | Negative | 1713176 - 1713457 | 10029.8 |
| duf2132 domain-containing protein | EJI01_08405 | Not Available | Negative | 1713454 - 1713714 | 9734.79 |
| gnat family n-acetyltransferase | EJI01_08410 | Not Available | Positive | 1713952 - 1714467 | 19019.7 |
| duf808 domain-containing protein | EJI01_08415 | Not Available | Positive | 1714480 - 1715385 | 30929.6 |
| trna 2-selenouridine(34) synthase mnmh | EJI01_08420 | Not Available | Negative | 1715372 - 1716433 | 39470.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
