Variovorax sp. MHTC-1

rod

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Betaproteobacteria

Order

Burkholderiales

Family

Comamonadaceae

Genus

Variovorax

Description

Variovorax sp. MHTC-1 is a rod-shaped bacterium characterized by having a single replicon. This trait indicates a streamlined genomic organization, which can be advantageous for efficiency in cellular processes such as replication and transcription. The organism is cataloged under the accession number RWKI00000000.1, which allows for its identification in genomic databases. The rod shape of Variovorax sp. MHTC-1 suggests that it may possess specific adaptations for movement and nutrient uptake in various environments, as this morphology is often associated with increased surface area relative to volume. This can facilitate interactions with substrates and enhance its capacity to colonize different ecological niches. Variovorax species are generally known for their metabolic versatility, which allows them to thrive in diverse environments, including soil and aquatic systems. While specific metabolic capabilities of Variovorax sp. MHTC-1 are not detailed in the provided traits, the genus is typically associated with the degradation of complex organic compounds, contributing to biogeochemical cycles. In summary, Variovorax sp. MHTC-1, with its rod shape and single replicon, exemplifies a bacterium that may be well-adapted for ecological resilience and nutrient cycling. Its presence in various environments highlights the ecological role such microorganisms play in maintaining environmental health and facilitating organic matter decomposition.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassBetaproteobacteria
OrderBurkholderiales
FamilyComamonadaceae
GenusVariovorax
SpeciesVariovorax sp. MHTC-1
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
Shaperod
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Variovorax sp. MHTC-1 126, whole genome shotgun sequence.

Gene Summary

Adenine Count

968631 bp

Thymine Count

969319 bp

Guanine Count

1978850 bp

Cytosine Count

1966842 bp

Genome Length

5892341 bp

Protein-coding Genes

5482 genes

Non-Coding Genes

49 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
osmc family peroxiredoxinEJI01_08325Not AvailableNegative1701083 - 170152315278.1
long-chain fatty acid--coa ligaseEJI01_08330Not AvailablePositive1701672 - 170337262373.1
rida family proteinEJI01_08335Not AvailableNegative1703369 - 170385417173.0
gnat family acetyltransferaseEJI01_08340Not AvailableNegative1703851 - 170427316023.3
voc family proteinEJI01_08345Not AvailableNegative1704308 - 170472415131.2
gnat family n-acetyltransferaseEJI01_08350Not AvailableNegative1704721 - 170527520281.0
nudix domain-containing proteinEJI01_08355Not AvailableNegative1705256 - 170573817823.2
nad(p)/fad-dependent oxidoreductaseEJI01_08360Not AvailableNegative1705762 - 170710848034.0
ergothioneine biosynthesis protein egtbEJI01_08365Not AvailablePositive1707246 - 170849646126.4
l-histidine n(alpha)-methyltransferaseEJI01_08370Not AvailablePositive1708496 - 170948236048.1

Displaying genes 1631 – 1640 of 5531 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.