Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. MHTC-1 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
968631 bp
Thymine Count
969319 bp
Guanine Count
1978850 bp
Cytosine Count
1966842 bp
Genome Length
5892341 bp
Protein-coding Genes
5482 genes
Non-Coding Genes
49 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| peptidase s58 family protein | EJI01_08275 | Not Available | Negative | 1693443 - 1694462 | 33898.6 |
| cation transporter | EJI01_08280 | Not Available | Negative | 1694455 - 1695102 | 22450.4 |
| cd(ii)/pb(ii)-responsive transcriptional regulator | EJI01_08285 | Not Available | Positive | 1695158 - 1695631 | 17496.9 |
| glycerophosphodiester phosphodiesterase | EJI01_08290 | Not Available | Negative | 1695660 - 1696652 | 36050.3 |
| duf1439 domain-containing protein | EJI01_08295 | Not Available | Negative | 1696649 - 1697227 | 20902.3 |
| amino acid abc transporter atp-binding protein | EJI01_08300 | Not Available | Negative | 1697276 - 1698043 | 27750.1 |
| amino acid abc transporter permease | EJI01_08305 | Not Available | Negative | 1698027 - 1698680 | 23505.4 |
| amino acid abc transporter permease | EJI01_08310 | Not Available | Negative | 1698691 - 1699347 | 23802.8 |
| transporter substrate-binding domain-containing protein | EJI01_08315 | Not Available | Negative | 1699479 - 1700270 | 27706.6 |
| gntr family transcriptional regulator | EJI01_08320 | Not Available | Negative | 1700267 - 1701016 | 27024.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
