Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. MHTC-1 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
968631 bp
Thymine Count
969319 bp
Guanine Count
1978850 bp
Cytosine Count
1966842 bp
Genome Length
5892341 bp
Protein-coding Genes
5482 genes
Non-Coding Genes
49 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| sn-glycerol-3-phosphate abc transporter atp-binding protein ugpc | EJI01_08225 | Not Available | Positive | 1679948 - 1681018 | 38329.3 |
| rubrerythrin | EJI01_08230 | Not Available | Positive | 1681176 - 1681598 | 15402.6 |
| fe-s oxidoreductase | EJI01_08235 | Not Available | Positive | 1681626 - 1682978 | 49535.1 |
| duf3501 family protein | EJI01_08240 | Not Available | Positive | 1682981 - 1683559 | 21560.6 |
| bifunctional metallophosphatase/5'-nucleotidase | EJI01_08245 | Not Available | Negative | 1683556 - 1685376 | 62029.9 |
| dead/deah box helicase | EJI01_08250 | Not Available | Negative | 1685527 - 1687326 | 62725.8 |
| methyltransferase domain-containing protein | EJI01_08255 | Not Available | Negative | 1687505 - 1688947 | 52663.8 |
| energy-dependent translational throttle protein etta | EJI01_08260 | Not Available | Positive | 1688966 - 1690627 | 61434.3 |
| pqq-dependent sugar dehydrogenase | EJI01_08265 | Not Available | Positive | 1690703 - 1691983 | 44717.9 |
| c4-dicarboxylate abc transporter substrate-binding protein | EJI01_08270 | Not Available | Negative | 1691980 - 1693338 | 50125.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
