Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. MHTC-1 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
968631 bp
Thymine Count
969319 bp
Guanine Count
1978850 bp
Cytosine Count
1966842 bp
Genome Length
5892341 bp
Protein-coding Genes
5482 genes
Non-Coding Genes
49 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| mate family efflux transporter | EJI01_08175 | Not Available | Positive | 1670321 - 1671724 | 48352.4 |
| sdr family oxidoreductase | EJI01_08180 | Not Available | Positive | 1671754 - 1672455 | 24142.7 |
| aldolase | EJI01_08185 | Not Available | Negative | 1672437 - 1673201 | 27615.1 |
| 2-dehydro-3-deoxy-6-phosphogalactonate aldolase | EJI01_08190 | Not Available | Negative | 1673213 - 1673854 | 21784.7 |
| 2-dehydro-3-deoxygalactonokinase | EJI01_08195 | Not Available | Negative | 1673851 - 1674747 | 31892.4 |
| 2-hydroxyacid dehydrogenase | EJI01_08200 | Not Available | Positive | 1674964 - 1675911 | 33413.4 |
| fadr family transcriptional regulator | EJI01_08205 | Not Available | Positive | 1675932 - 1676675 | 27109.0 |
| carbohydrate abc transporter substrate-binding protein | EJI01_08210 | Not Available | Positive | 1676747 - 1678123 | 51097.6 |
| sugar abc transporter permease | EJI01_08215 | Not Available | Positive | 1678215 - 1679084 | 32562.6 |
| carbohydrate abc transporter permease | EJI01_08220 | Not Available | Positive | 1679081 - 1679932 | 31634.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
