Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. MHTC-1 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
968631 bp
Thymine Count
969319 bp
Guanine Count
1978850 bp
Cytosine Count
1966842 bp
Genome Length
5892341 bp
Protein-coding Genes
5482 genes
Non-Coding Genes
49 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| pyridoxamine 5'-phosphate oxidase | EJI01_08075 | Not Available | Negative | 1652699 - 1653346 | 24482.9 |
| nucleotidyltransferase family protein | EJI01_08080 | Not Available | Positive | 1653387 - 1653950 | 19117.2 |
| superoxide dismutase family protein | EJI01_08085 | Not Available | Negative | 1653937 - 1654476 | 17901.1 |
| calcium transporter chac | EJI01_08090 | Not Available | Negative | 1654480 - 1655163 | 25323.2 |
| ompa family protein | EJI01_08095 | Not Available | Positive | 1655263 - 1655772 | 17443.0 |
| cupin domain-containing protein | EJI01_08100 | Not Available | Negative | 1655776 - 1656162 | 13792.6 |
| lysr family transcriptional regulator | EJI01_08105 | Not Available | Positive | 1656279 - 1657160 | 32426.6 |
| phosphogluconate dehydratase | EJI01_08110 | Not Available | Positive | 1657247 - 1659085 | 64377.3 |
| bifunctional 4-hydroxy-2-oxoglutarate aldolase/2-dehydro-3-deoxy-phosphogluconate aldolase | EJI01_08115 | Not Available | Positive | 1659076 - 1659717 | 22082.0 |
| haloacid dehalogenase type ii | EJI01_08120 | Not Available | Positive | 1659714 - 1660442 | 26210.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
