Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. MHTC-1 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
968631 bp
Thymine Count
969319 bp
Guanine Count
1978850 bp
Cytosine Count
1966842 bp
Genome Length
5892341 bp
Protein-coding Genes
5482 genes
Non-Coding Genes
49 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| sulfurtransferase | EJI01_08025 | Not Available | Negative | 1641720 - 1642058 | 12215.4 |
| protein-l-isoaspartate o-methyltransferase | EJI01_08030 | Not Available | Negative | 1642070 - 1642753 | 25050.5 |
| efflux rnd transporter permease subunit | EJI01_08035 | Not Available | Negative | 1642783 - 1646046 | 117981.0 |
| efflux rnd transporter periplasmic adaptor subunit | EJI01_08040 | Not Available | Negative | 1646060 - 1647220 | 40290.6 |
| tetr/acrr family transcriptional regulator | EJI01_08045 | Not Available | Negative | 1647217 - 1647897 | 25408.7 |
| peptide-methionine (s)-s-oxide reductase | EJI01_08050 | Not Available | Positive | 1648003 - 1648557 | 20663.1 |
| hypothetical protein | EJI01_08055 | Not Available | Positive | 1648572 - 1648955 | 13625.6 |
| tonb-dependent receptor | EJI01_08060 | Not Available | Positive | 1649036 - 1651117 | 74602.1 |
| voc family protein | EJI01_08065 | Not Available | Negative | 1651208 - 1651666 | 16636.8 |
| aec family transporter | EJI01_08070 | Not Available | Positive | 1651739 - 1652686 | 32827.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
