Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. MHTC-1 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
968631 bp
Thymine Count
969319 bp
Guanine Count
1978850 bp
Cytosine Count
1966842 bp
Genome Length
5892341 bp
Protein-coding Genes
5482 genes
Non-Coding Genes
49 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| sigma-70 family rna polymerase sigma factor | EJI01_07975 | Not Available | Positive | 1618624 - 1619178 | 20369.3 |
| duf4880 domain-containing protein | EJI01_07980 | Not Available | Positive | 1619269 - 1619496 | 8504.98 |
| antibiotic synthesis protein mbth | EJI01_07985 | Not Available | Positive | 1619603 - 1619851 | 9333.84 |
| thioesterase | EJI01_07990 | Not Available | Positive | 1619858 - 1620595 | 26987.4 |
| 4'-phosphopantetheinyl transferase superfamily protein | EJI01_07995 | Not Available | Positive | 1620573 - 1621256 | 24316.0 |
| taud/tfda family dioxygenase | EJI01_08000 | Not Available | Positive | 1621261 - 1622241 | 36714.6 |
| amino acid adenylation domain-containing protein | EJI01_08005 | Not Available | Positive | 1622263 - 1627563 | 192078.0 |
| sdr family nad(p)-dependent oxidoreductase | EJI01_08010 | Not Available | Positive | 1627563 - 1632152 | 161840.0 |
| amino acid adenylation domain-containing protein | EJI01_08015 | Not Available | Positive | 1632164 - 1640023 | 286405.0 |
| channel protein tolc | EJI01_08020 | Not Available | Negative | 1640191 - 1641698 | 53124.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
