Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. MHTC-1 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
968631 bp
Thymine Count
969319 bp
Guanine Count
1978850 bp
Cytosine Count
1966842 bp
Genome Length
5892341 bp
Protein-coding Genes
5482 genes
Non-Coding Genes
49 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| tetr family transcriptional regulator | EJI01_07870 | Not Available | Negative | 1600128 - 1600775 | 24645.6 |
| thiamine pyrophosphate-binding protein | EJI01_07875 | Not Available | Positive | 1600869 - 1602593 | 61531.6 |
| hypothetical protein | EJI01_07880 | Not Available | Negative | 1602656 - 1603072 | 14381.0 |
| dmt family transporter | EJI01_07885 | Not Available | Negative | 1603256 - 1604182 | 32620.1 |
| gamma-glutamylcyclotransferase | EJI01_07890 | Not Available | Positive | 1604222 - 1604638 | 14679.6 |
| isocitrate lyase | EJI01_07895 | Not Available | Positive | 1604857 - 1606176 | 48551.3 |
| threonine--trna ligase | EJI01_07900 | Not Available | Positive | 1606448 - 1608355 | 72549.9 |
| translation initiation factor if-3 | EJI01_07905 | Not Available | Positive | 1608455 - 1609066 | 22865.8 |
| 50s ribosomal protein l35 | EJI01_07910 | Not Available | Positive | 1609214 - 1609417 | 7447.43 |
| 50s ribosomal protein l20 | EJI01_07915 | Not Available | Positive | 1609442 - 1609801 | 13388.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
