Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. MHTC-1 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
968631 bp
Thymine Count
969319 bp
Guanine Count
1978850 bp
Cytosine Count
1966842 bp
Genome Length
5892341 bp
Protein-coding Genes
5482 genes
Non-Coding Genes
49 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| phoh family protein | EJI01_07665 | Not Available | Negative | 1558500 - 1560248 | 63490.6 |
| peroxiredoxin | EJI01_07670 | Not Available | Negative | 1560440 - 1560916 | 17536.5 |
| hypothetical protein | EJI01_07675 | Not Available | Negative | 1561051 - 1561437 | 13853.6 |
| pyridoxal phosphate-dependent aminotransferase | EJI01_07680 | Not Available | Positive | 1561504 - 1562730 | 44912.1 |
| homoserine dehydrogenase | EJI01_07685 | Not Available | Positive | 1562759 - 1564081 | 46512.6 |
| threonine synthase | EJI01_07690 | Not Available | Positive | 1564081 - 1565496 | 51835.7 |
| molybdopterin-guanine dinucleotide biosynthesis protein b | EJI01_07695 | Not Available | Positive | 1565515 - 1566060 | 20243.1 |
| molybdopterin molybdenumtransferase moea | EJI01_07700 | Not Available | Positive | 1566083 - 1567300 | 42577.4 |
| molybdopterin converting factor subunit 1 | EJI01_07705 | Not Available | Positive | 1567303 - 1567554 | 8678.33 |
| 4-hydroxy-tetrahydrodipicolinate synthase | EJI01_07710 | Not Available | Negative | 1567541 - 1568530 | 34793.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
