Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. MHTC-1 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
968631 bp
Thymine Count
969319 bp
Guanine Count
1978850 bp
Cytosine Count
1966842 bp
Genome Length
5892341 bp
Protein-coding Genes
5482 genes
Non-Coding Genes
49 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| sulfate abc transporter substrate-binding protein | EJI01_00730 | Not Available | Positive | 147341 - 148342 | 35817.7 |
| sulfate abc transporter permease subunit cyst | EJI01_00735 | Not Available | Positive | 148343 - 149233 | 31476.5 |
| sulfate abc transporter permease subunit cysw | EJI01_00740 | Not Available | Positive | 149230 - 150132 | 32542.3 |
| sulfate abc transporter atp-binding protein | EJI01_00745 | Not Available | Positive | 150145 - 151239 | 40560.5 |
| disulfide bond formation protein b | EJI01_00750 | Not Available | Positive | 151236 - 151769 | 19116.9 |
| mobilization protein | EJI01_00755 | Not Available | Negative | 151739 - 152431 | 25338.8 |
| xre family transcriptional regulator | EJI01_00760 | Not Available | Positive | 152635 - 152937 | 10703.1 |
| type ii toxin-antitoxin system hipa family toxin | EJI01_00765 | Not Available | Positive | 152934 - 154307 | 50410.0 |
| hypothetical protein | EJI01_00770 | Not Available | Negative | 154315 - 155064 | 27626.9 |
| chromosome segregation protein smc | EJI01_00775 | Not Available | Positive | 155183 - 158698 | 130113.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
