Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. MHTC-1 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
968631 bp
Thymine Count
969319 bp
Guanine Count
1978850 bp
Cytosine Count
1966842 bp
Genome Length
5892341 bp
Protein-coding Genes
5482 genes
Non-Coding Genes
49 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Trna-val | Not Available | Not Available | Positive | 1533225 - 1533300 | Not Available |
| peptidyl-prolyl cis-trans isomerase | EJI01_07510 | Not Available | Positive | 1533375 - 1535288 | 69415.0 |
| Trna-his | Not Available | Not Available | Positive | 1535319 - 1535394 | Not Available |
| h-ns histone family protein | EJI01_07520 | Not Available | Positive | 1535512 - 1535850 | 12283.6 |
| nadph:quinone oxidoreductase family protein | EJI01_07525 | Not Available | Negative | 1535914 - 1536900 | 34338.0 |
| 5'/3'-nucleotidase sure | EJI01_07530 | Not Available | Positive | 1537027 - 1537791 | 27220.3 |
| protein-l-isoaspartate(d-aspartate) o-methyltransferase | EJI01_07535 | Not Available | Positive | 1537793 - 1538566 | 27052.2 |
| lysm peptidoglycan-binding domain-containing protein | EJI01_07540 | Not Available | Positive | 1538578 - 1539525 | 32056.1 |
| sigma-70 family rna polymerase sigma factor | EJI01_07545 | Not Available | Positive | 1539534 - 1540574 | 38369.7 |
| 23s rrna (uracil(1939)-c(5))-methyltransferase rlmd | EJI01_07550 | Not Available | Positive | 1540618 - 1542054 | 52605.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
