Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. MHTC-1 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
968631 bp
Thymine Count
969319 bp
Guanine Count
1978850 bp
Cytosine Count
1966842 bp
Genome Length
5892341 bp
Protein-coding Genes
5482 genes
Non-Coding Genes
49 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| histone deacetylase | EJI01_07405 | Not Available | Positive | 1514283 - 1515224 | 34565.0 |
| acyl-coa thioesterase | EJI01_07410 | Not Available | Positive | 1515221 - 1515670 | 16546.5 |
| hypothetical protein | EJI01_07415 | Not Available | Negative | 1515716 - 1516123 | 14832.8 |
| csbd family protein | EJI01_07420 | Not Available | Negative | 1516152 - 1516385 | 9105.6 |
| nicotinate phosphoribosyltransferase | EJI01_07425 | Not Available | Positive | 1516572 - 1517801 | 46838.6 |
| sodium:proton antiporter | EJI01_07430 | Not Available | Positive | 1517798 - 1519210 | 50184.2 |
| d-glycerate dehydrogenase | EJI01_07435 | Not Available | Positive | 1519213 - 1520199 | 35229.6 |
| dna recombination protein rmuc | EJI01_07440 | Not Available | Positive | 1520206 - 1521558 | 49863.8 |
| mfs transporter | EJI01_07445 | Not Available | Positive | 1521572 - 1522753 | 41094.8 |
| tigr00730 family rossman fold protein | EJI01_07450 | Not Available | Negative | 1522741 - 1523607 | 32154.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
