Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. MHTC-1 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
968631 bp
Thymine Count
969319 bp
Guanine Count
1978850 bp
Cytosine Count
1966842 bp
Genome Length
5892341 bp
Protein-coding Genes
5482 genes
Non-Coding Genes
49 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| coa transferase | EJI01_07355 | Not Available | Positive | 1502214 - 1503368 | 41806.1 |
| tripartite tricarboxylate transporter substrate binding protein | EJI01_07360 | Not Available | Positive | 1503400 - 1504377 | 33435.8 |
| quaternary ammonium compound efflux smr transporter suge | EJI01_07365 | Not Available | Negative | 1504381 - 1504701 | 11054.1 |
| hpp family protein | EJI01_07370 | Not Available | Negative | 1504727 - 1505857 | 41476.5 |
| bcr/cfla family efflux mfs transporter | EJI01_07375 | Not Available | Negative | 1505863 - 1507101 | 44515.4 |
| rna polymerase sigma factor rpod | EJI01_07380 | Not Available | Negative | 1507202 - 1509514 | 85652.7 |
| dna primase | EJI01_07385 | Not Available | Negative | 1509794 - 1511686 | 68552.2 |
| yihy/virulence factor brkb family protein | EJI01_07390 | Not Available | Positive | 1511777 - 1512730 | 34614.3 |
| 3-hydroxyacyl-coa dehydrogenase | EJI01_07395 | Not Available | Negative | 1512678 - 1513436 | 25845.5 |
| phasin family protein | EJI01_07400 | Not Available | Negative | 1513542 - 1514099 | 19035.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
