Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. MHTC-1 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
968631 bp
Thymine Count
969319 bp
Guanine Count
1978850 bp
Cytosine Count
1966842 bp
Genome Length
5892341 bp
Protein-coding Genes
5482 genes
Non-Coding Genes
49 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| abc transporter permease subunit | EJI01_07250 | Not Available | Negative | 1482225 - 1483760 | 54325.8 |
| alpha/beta fold hydrolase | EJI01_07255 | Not Available | Positive | 1483820 - 1484644 | 30190.7 |
| rok family protein | EJI01_07260 | Not Available | Positive | 1484667 - 1485737 | 39490.9 |
| phospholipase | EJI01_07265 | Not Available | Negative | 1485734 - 1487104 | 50525.0 |
| glutathione s-transferase family protein | EJI01_07270 | Not Available | Negative | 1487110 - 1487790 | 25137.4 |
| 5-methyltetrahydropteroyltriglutamate-- homocysteine s-methyltransferase | EJI01_07275 | Not Available | Negative | 1487947 - 1489065 | 41567.6 |
| aromatic ring-hydroxylating dioxygenase subunit alpha | EJI01_07280 | Not Available | Positive | 1489213 - 1490322 | 41287.9 |
| gntr family transcriptional regulator | EJI01_07285 | Not Available | Positive | 1490319 - 1491083 | 27515.0 |
| oxidoreductase | EJI01_07290 | Not Available | Positive | 1491083 - 1492081 | 35436.5 |
| abc transporter substrate-binding protein | EJI01_07295 | Not Available | Positive | 1492237 - 1493409 | 41849.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
