Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. MHTC-1 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
968631 bp
Thymine Count
969319 bp
Guanine Count
1978850 bp
Cytosine Count
1966842 bp
Genome Length
5892341 bp
Protein-coding Genes
5482 genes
Non-Coding Genes
49 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| galactarate dehydratase | EJI01_07200 | Not Available | Negative | 1471324 - 1472898 | 56438.8 |
| trap transporter large permease | EJI01_07205 | Not Available | Negative | 1472895 - 1474193 | 45324.4 |
| trap transporter small permease | EJI01_07210 | Not Available | Negative | 1474184 - 1474630 | 16230.6 |
| trap transporter substrate-binding protein | EJI01_07215 | Not Available | Negative | 1474720 - 1475688 | 35243.6 |
| smp-30/gluconolactonase/lre family protein | EJI01_07220 | Not Available | Negative | 1475732 - 1476622 | 31627.5 |
| nad(p)-dependent oxidoreductase | EJI01_07225 | Not Available | Negative | 1476628 - 1477455 | 29953.4 |
| fadr family transcriptional regulator | EJI01_07230 | Not Available | Positive | 1477522 - 1478346 | 29479.9 |
| tripartite tricarboxylate transporter substrate binding protein | EJI01_07235 | Not Available | Positive | 1478475 - 1479449 | 34127.4 |
| 5-dehydro-4-deoxyglucarate dehydratase | EJI01_07240 | Not Available | Positive | 1479553 - 1480464 | 32726.4 |
| aldehyde dehydrogenase family protein | EJI01_07245 | Not Available | Positive | 1480570 - 1482006 | 50583.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
