Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. MHTC-1 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
968631 bp
Thymine Count
969319 bp
Guanine Count
1978850 bp
Cytosine Count
1966842 bp
Genome Length
5892341 bp
Protein-coding Genes
5482 genes
Non-Coding Genes
49 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ai-2e family transporter | EJI01_06950 | Not Available | Negative | 1423511 - 1424614 | 39514.4 |
| fad-binding oxidoreductase | EJI01_06955 | Not Available | Negative | 1424670 - 1425974 | 47526.4 |
| homospermidine synthase | EJI01_06960 | Not Available | Negative | 1425976 - 1427394 | 52496.8 |
| duf72 domain-containing protein | EJI01_06965 | Not Available | Positive | 1427662 - 1428612 | 36120.3 |
| lysr family transcriptional regulator | EJI01_06970 | Not Available | Negative | 1428615 - 1429523 | 33325.7 |
| 2fe-2s iron-sulfur cluster binding domain-containing protein | EJI01_06975 | Not Available | Positive | 1429609 - 1430604 | 35951.5 |
| salicylate hydroxylase | EJI01_06980 | Not Available | Positive | 1430635 - 1431897 | 48392.5 |
| salicylate hydroxylase | EJI01_06985 | Not Available | Positive | 1432054 - 1432527 | 18221.5 |
| non-heme iron oxygenase ferredoxin subunit | EJI01_06990 | Not Available | Positive | 1432550 - 1432870 | 11370.3 |
| mfs transporter | EJI01_06995 | Not Available | Negative | 1432879 - 1434054 | 40789.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
