Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. MHTC-1 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
968631 bp
Thymine Count
969319 bp
Guanine Count
1978850 bp
Cytosine Count
1966842 bp
Genome Length
5892341 bp
Protein-coding Genes
5482 genes
Non-Coding Genes
49 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| competence/damage-inducible protein a | EJI01_06895 | Not Available | Positive | 1413661 - 1414476 | 29300.4 |
| type i glutamate--ammonia ligase | EJI01_06900 | Not Available | Positive | 1414624 - 1416039 | 52267.1 |
| hypothetical protein | EJI01_06905 | Not Available | Positive | 1416172 - 1416675 | 18128.3 |
| pas domain-containing sensor histidine kinase | EJI01_06910 | Not Available | Positive | 1416675 - 1417751 | 40034.1 |
| nitrogen regulation protein nr(i) | EJI01_06915 | Not Available | Positive | 1417774 - 1419294 | 54604.5 |
| hypothetical protein | EJI01_06920 | Not Available | Negative | 1419313 - 1419825 | 18359.1 |
| exodeoxyribonuclease iii | EJI01_06925 | Not Available | Negative | 1419822 - 1420601 | 29288.0 |
| hydrolase | EJI01_06930 | Not Available | Negative | 1420661 - 1421353 | 24416.5 |
| erythromycin esterase family protein | EJI01_06935 | Not Available | Negative | 1421356 - 1422699 | 50080.5 |
| hypothetical protein | EJI01_06940 | Not Available | Negative | 1422705 - 1423154 | 15616.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
