Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. MHTC-1 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
968631 bp
Thymine Count
969319 bp
Guanine Count
1978850 bp
Cytosine Count
1966842 bp
Genome Length
5892341 bp
Protein-coding Genes
5482 genes
Non-Coding Genes
49 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| tripartite tricarboxylate transporter substrate binding protein | EJI01_06835 | Not Available | Negative | 1398742 - 1399710 | 33915.2 |
| lysr family transcriptional regulator | EJI01_06840 | Not Available | Positive | 1399884 - 1400711 | 29462.9 |
| autotransporter outer membrane beta-barrel domain-containing protein | EJI01_06850 | Not Available | Negative | 1401150 - 1404806 | 117781.0 |
| methyltransferase domain-containing protein | EJI01_06860 | Not Available | Positive | 1405865 - 1407457 | 58009.9 |
| gamma-glutamyltransferase | EJI01_06865 | Not Available | Positive | 1407483 - 1409219 | 60951.1 |
| 16s rrna pseudouridine(516) synthase | EJI01_06870 | Not Available | Positive | 1409219 - 1409977 | 27692.4 |
| ynce family protein | EJI01_06875 | Not Available | Positive | 1410066 - 1410995 | 33759.4 |
| polysaccharide deacetylase family protein | EJI01_06880 | Not Available | Positive | 1410982 - 1411779 | 28790.3 |
| sterol desaturase family protein | EJI01_06885 | Not Available | Positive | 1411796 - 1412767 | 36900.6 |
| ei24 domain-containing protein | EJI01_06890 | Not Available | Positive | 1412804 - 1413676 | 31621.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
