Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. MHTC-1 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
968631 bp
Thymine Count
969319 bp
Guanine Count
1978850 bp
Cytosine Count
1966842 bp
Genome Length
5892341 bp
Protein-coding Genes
5482 genes
Non-Coding Genes
49 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dna gyrase subunit a | EJI01_06775 | Not Available | Negative | 1386843 - 1389491 | 97960.3 |
| ompa family protein | EJI01_06780 | Not Available | Positive | 1389715 - 1390374 | 23162.6 |
| bifunctional 2-polyprenyl-6-hydroxyphenol methylase/3-demethylubiquinol 3-o-methyltransferase ubig | EJI01_06785 | Not Available | Positive | 1390500 - 1391222 | 26673.1 |
| had family hydrolase | EJI01_06790 | Not Available | Positive | 1391222 - 1391890 | 23628.4 |
| Tmrna,resume consensus sequence (at 84): actaactgcaaacgacga | Not Available | Not Available | Positive | 1391903 - 1392290 | Not Available |
| spore coat u domain-containing protein | EJI01_06805 | Not Available | Negative | 1392897 - 1393904 | 34458.8 |
| fimbrial biogenesis outer membrane usher protein | EJI01_06810 | Not Available | Negative | 1393901 - 1396219 | 82010.9 |
| molecular chaperone | EJI01_06815 | Not Available | Negative | 1396273 - 1397124 | 30056.0 |
| scpu domain-containing protein | EJI01_06820 | Not Available | Negative | 1397133 - 1397630 | 16778.4 |
| hypothetical protein | EJI01_06830 | Not Available | Negative | 1398260 - 1398739 | 17675.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
