Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. MHTC-1 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
968631 bp
Thymine Count
969319 bp
Guanine Count
1978850 bp
Cytosine Count
1966842 bp
Genome Length
5892341 bp
Protein-coding Genes
5482 genes
Non-Coding Genes
49 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| helix-hairpin-helix domain-containing protein | EJI01_06725 | Not Available | Negative | 1376903 - 1377253 | 12019.7 |
| lipopolysaccharide assembly protein lapb | EJI01_06730 | Not Available | Negative | 1377393 - 1378577 | 43918.0 |
| lapa family protein | EJI01_06735 | Not Available | Negative | 1378567 - 1378878 | 10991.5 |
| integration host factor subunit beta | EJI01_06740 | Not Available | Negative | 1378911 - 1379225 | 11735.0 |
| 30s ribosomal protein s1 | EJI01_06745 | Not Available | Negative | 1379275 - 1380960 | 61775.8 |
| bifunctional 3-phosphoshikimate 1-carboxyvinyltransferase/cytidylate kinase | EJI01_06750 | Not Available | Negative | 1381128 - 1383125 | 71659.4 |
| prephenate dehydrogenase | EJI01_06755 | Not Available | Negative | 1383128 - 1384006 | 30756.0 |
| prephenate dehydratase | EJI01_06760 | Not Available | Negative | 1384015 - 1385133 | 40287.1 |
| 3-phosphoserine/phosphohydroxythreonine transaminase | EJI01_06765 | Not Available | Negative | 1385153 - 1386220 | 38622.1 |
| duf2059 domain-containing protein | EJI01_06770 | Not Available | Negative | 1386265 - 1386846 | 20693.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
