Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. MHTC-1 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
968631 bp
Thymine Count
969319 bp
Guanine Count
1978850 bp
Cytosine Count
1966842 bp
Genome Length
5892341 bp
Protein-coding Genes
5482 genes
Non-Coding Genes
49 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| phenylacetate-coa oxygenase/reductase subunit paak | EJI01_06375 | Not Available | Positive | 1312178 - 1313260 | 39701.7 |
| abc transporter substrate-binding protein | EJI01_06380 | Not Available | Positive | 1313295 - 1314446 | 40392.8 |
| branched-chain amino acid abc transporter permease | EJI01_06385 | Not Available | Positive | 1314649 - 1315677 | 36045.3 |
| branched-chain amino acid abc transporter atp-binding protein/permease | EJI01_06390 | Not Available | Positive | 1315769 - 1317613 | 65297.9 |
| abc transporter atp-binding protein | EJI01_06395 | Not Available | Positive | 1317610 - 1318347 | 26783.9 |
| lysr family transcriptional regulator | EJI01_06400 | Not Available | Negative | 1318388 - 1319482 | 39537.6 |
| abc transporter permease subunit | EJI01_06405 | Not Available | Positive | 1319612 - 1320361 | 25821.3 |
| phosphate abc transporter atp-binding protein | EJI01_06410 | Not Available | Positive | 1320358 - 1321050 | 24866.4 |
| tungsten abc transporter substrate-binding protein | EJI01_06415 | Not Available | Positive | 1321047 - 1321877 | 28993.6 |
| hypothetical protein | EJI01_06420 | Not Available | Positive | 1321995 - 1322243 | 8986.59 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
