Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. MHTC-1 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
968631 bp
Thymine Count
969319 bp
Guanine Count
1978850 bp
Cytosine Count
1966842 bp
Genome Length
5892341 bp
Protein-coding Genes
5482 genes
Non-Coding Genes
49 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glycosyltransferase family 1 protein | EJI01_06325 | Not Available | Negative | 1303367 - 1304659 | 48130.4 |
| guanine deaminase | EJI01_06330 | Not Available | Positive | 1304695 - 1305981 | 46765.4 |
| phenylacetic acid degradation protein paay | EJI01_06335 | Not Available | Negative | 1305985 - 1306587 | 21285.6 |
| 2-(1,2-epoxy-1,2-dihydrophenyl)acetyl-coa isomerase | EJI01_06340 | Not Available | Positive | 1306761 - 1307564 | 27826.8 |
| hydroxyphenylacetyl-coa thioesterase paai | EJI01_06345 | Not Available | Positive | 1307577 - 1308014 | 15659.6 |
| phenylacetate--coa ligase | EJI01_06350 | Not Available | Positive | 1308033 - 1309352 | 48739.6 |
| 1,2-phenylacetyl-coa epoxidase subunit a | EJI01_06355 | Not Available | Positive | 1309366 - 1310376 | 38304.5 |
| 1,2-phenylacetyl-coa epoxidase subunit b | EJI01_06360 | Not Available | Positive | 1310373 - 1310669 | 11357.4 |
| phenylacetate-coa oxygenase subunit paai | EJI01_06365 | Not Available | Positive | 1310785 - 1311564 | 28511.9 |
| phenylacetate-coa oxygenase subunit paaj | EJI01_06370 | Not Available | Positive | 1311558 - 1312181 | 22102.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
