Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. MHTC-1 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
968631 bp
Thymine Count
969319 bp
Guanine Count
1978850 bp
Cytosine Count
1966842 bp
Genome Length
5892341 bp
Protein-coding Genes
5482 genes
Non-Coding Genes
49 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| abc transporter atp-binding protein | EJI01_06275 | Not Available | Positive | 1293570 - 1295099 | 54506.1 |
| abc transporter permease | EJI01_06280 | Not Available | Positive | 1295092 - 1296246 | 40299.5 |
| abc transporter permease | EJI01_06285 | Not Available | Positive | 1296332 - 1297252 | 32328.3 |
| bmp family abc transporter substrate-binding protein | EJI01_06290 | Not Available | Positive | 1297304 - 1298473 | 41344.0 |
| aromatic ring-hydroxylating dioxygenase subunit alpha | EJI01_06295 | Not Available | Positive | 1298616 - 1299608 | 36110.8 |
| adenosine deaminase | EJI01_06300 | Not Available | Positive | 1299605 - 1300660 | 38796.3 |
| hypothetical protein | EJI01_06305 | Not Available | Negative | 1300667 - 1300867 | 7807.04 |
| hypothetical protein | EJI01_06310 | Not Available | Negative | 1300912 - 1301256 | 12545.0 |
| bmp family abc transporter substrate-binding protein | EJI01_06315 | Not Available | Positive | 1301605 - 1302702 | 39504.5 |
| acyltransferase | EJI01_06320 | Not Available | Negative | 1302708 - 1303370 | 24151.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
