Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. MHTC-1 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
968631 bp
Thymine Count
969319 bp
Guanine Count
1978850 bp
Cytosine Count
1966842 bp
Genome Length
5892341 bp
Protein-coding Genes
5482 genes
Non-Coding Genes
49 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | EJI01_06170 | Not Available | Negative | 1270797 - 1271315 | 17721.1 |
| hypothetical protein | EJI01_06175 | Not Available | Negative | 1271539 - 1272501 | 32470.4 |
| hypothetical protein | EJI01_06180 | Not Available | Positive | 1272822 - 1273538 | 26438.9 |
| gnat family n-acetyltransferase | EJI01_06185 | Not Available | Positive | 1274109 - 1274660 | 19547.6 |
| duf839 domain-containing protein | EJI01_06190 | Not Available | Positive | 1274863 - 1276362 | 51797.7 |
| hypothetical protein | EJI01_06195 | Not Available | Negative | 1276402 - 1276863 | 17518.8 |
| transcriptional regulator | EJI01_06200 | Not Available | Negative | 1277061 - 1277423 | 13395.2 |
| nuclear transport factor 2 family protein | EJI01_06205 | Not Available | Positive | 1277500 - 1277955 | 16965.3 |
| acyl-coa thioesterase | EJI01_06210 | Not Available | Negative | 1277963 - 1278376 | 15692.8 |
| tripartite tricarboxylate transporter substrate binding protein | EJI01_06215 | Not Available | Negative | 1278403 - 1279386 | 34248.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
