Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. MHTC-1 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
968631 bp
Thymine Count
969319 bp
Guanine Count
1978850 bp
Cytosine Count
1966842 bp
Genome Length
5892341 bp
Protein-coding Genes
5482 genes
Non-Coding Genes
49 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| rida family protein | EJI01_06120 | Not Available | Positive | 1264067 - 1264453 | 14459.4 |
| class i sam-dependent methyltransferase | EJI01_06125 | Not Available | Positive | 1264485 - 1265339 | 32534.6 |
| alpha/beta hydrolase | EJI01_06130 | Not Available | Negative | 1265346 - 1266179 | 30371.6 |
| lysr family transcriptional regulator | EJI01_06135 | Not Available | Negative | 1266199 - 1267173 | 36204.6 |
| rida family protein | EJI01_06140 | Not Available | Positive | 1267317 - 1267721 | 14951.7 |
| hypothetical protein | EJI01_06145 | Not Available | Positive | 1267785 - 1268207 | 15652.6 |
| hypothetical protein | EJI01_06150 | Not Available | Positive | 1268238 - 1268465 | 8664.33 |
| vanz family protein | EJI01_06155 | Not Available | Positive | 1268526 - 1268825 | 10650.1 |
| histidine kinase | EJI01_06160 | Not Available | Positive | 1268988 - 1269803 | 28269.2 |
| yihy/virulence factor brkb family protein | EJI01_06165 | Not Available | Positive | 1269836 - 1270753 | 32574.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
