Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. MHTC-1 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
968631 bp
Thymine Count
969319 bp
Guanine Count
1978850 bp
Cytosine Count
1966842 bp
Genome Length
5892341 bp
Protein-coding Genes
5482 genes
Non-Coding Genes
49 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dihydroxy-acid dehydratase | EJI01_05970 | Not Available | Positive | 1232049 - 1233791 | 61480.4 |
| aldo/keto reductase | EJI01_05975 | Not Available | Positive | 1233843 - 1234853 | 36801.9 |
| methionine synthase | EJI01_05980 | Not Available | Negative | 1234869 - 1235900 | 38190.0 |
| abc transporter substrate-binding protein | EJI01_05985 | Not Available | Negative | 1235924 - 1237075 | 41316.3 |
| hamp domain-containing protein | EJI01_05990 | Not Available | Positive | 1237037 - 1239514 | 89420.6 |
| response regulator | EJI01_05995 | Not Available | Positive | 1239543 - 1239920 | 13551.7 |
| adenylate/guanylate cyclase domain-containing response regulator | EJI01_06000 | Not Available | Positive | 1239917 - 1241038 | 41061.5 |
| crp/fnr family transcriptional regulator | EJI01_06005 | Not Available | Negative | 1241048 - 1241686 | 23491.3 |
| phospholipase d family protein | EJI01_06010 | Not Available | Positive | 1241854 - 1243503 | 59050.8 |
| arge/dape family deacylase | EJI01_06015 | Not Available | Negative | 1243593 - 1244819 | 44405.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
