Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. MHTC-1 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
968631 bp
Thymine Count
969319 bp
Guanine Count
1978850 bp
Cytosine Count
1966842 bp
Genome Length
5892341 bp
Protein-coding Genes
5482 genes
Non-Coding Genes
49 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | EJI01_05860 | Not Available | Negative | 1211324 - 1211509 | 6467.23 |
| class a beta-lactamase-related serine hydrolase | EJI01_05865 | Not Available | Negative | 1211615 - 1212493 | 31750.1 |
| trkh family potassium uptake protein | EJI01_05870 | Not Available | Negative | 1212623 - 1214089 | 52683.7 |
| trk system potassium transporter trka | EJI01_05875 | Not Available | Negative | 1214105 - 1215571 | 53533.9 |
| hypothetical protein | EJI01_05880 | Not Available | Negative | 1215643 - 1215978 | 11624.8 |
| sensor histidine kinase | EJI01_05890 | Not Available | Negative | 1216784 - 1217980 | 44000.1 |
| pas domain s-box protein | EJI01_05895 | Not Available | Positive | 1218088 - 1222140 | 152289.0 |
| response regulator transcription factor | EJI01_05900 | Not Available | Positive | 1222140 - 1222766 | 22942.0 |
| response regulator | EJI01_05905 | Not Available | Positive | 1222891 - 1223271 | 13482.2 |
| hypothetical protein | EJI01_05910 | Not Available | Positive | 1223330 - 1223557 | 7988.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
