Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. MHTC-1 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
968631 bp
Thymine Count
969319 bp
Guanine Count
1978850 bp
Cytosine Count
1966842 bp
Genome Length
5892341 bp
Protein-coding Genes
5482 genes
Non-Coding Genes
49 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| c4-dicarboxylate abc transporter | EJI01_05810 | Not Available | Negative | 1202253 - 1203245 | 36410.1 |
| 3-dehydroquinate dehydratase | EJI01_05815 | Not Available | Negative | 1203286 - 1203735 | 16241.6 |
| iclr family transcriptional regulator | EJI01_05820 | Not Available | Positive | 1203877 - 1204671 | 28135.3 |
| lysr family transcriptional regulator | EJI01_05825 | Not Available | Negative | 1204679 - 1205596 | 33808.3 |
| sdr family oxidoreductase | EJI01_05830 | Not Available | Positive | 1205711 - 1206460 | 25413.0 |
| trap transporter substrate-binding protein | EJI01_05835 | Not Available | Positive | 1206501 - 1207493 | 34948.5 |
| trap transporter small permease | EJI01_05840 | Not Available | Positive | 1207556 - 1208080 | 18604.1 |
| trap transporter large permease subunit | EJI01_05845 | Not Available | Positive | 1208112 - 1209371 | 43996.9 |
| transketolase | EJI01_05850 | Not Available | Positive | 1209405 - 1210259 | 30968.7 |
| transketolase family protein | EJI01_05855 | Not Available | Positive | 1210256 - 1211254 | 35857.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
