Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. MHTC-1 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
968631 bp
Thymine Count
969319 bp
Guanine Count
1978850 bp
Cytosine Count
1966842 bp
Genome Length
5892341 bp
Protein-coding Genes
5482 genes
Non-Coding Genes
49 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| lysr family transcriptional regulator | EJI01_05655 | Not Available | Negative | 1173455 - 1174378 | 33924.2 |
| sulfatase | EJI01_05660 | Not Available | Negative | 1174418 - 1175983 | 57089.7 |
| abc transporter substrate-binding protein | EJI01_05665 | Not Available | Negative | 1175938 - 1176909 | 33235.3 |
| helicase snf2 | EJI01_05670 | Not Available | Positive | 1177280 - 1177663 | 12739.9 |
| alpha/beta hydrolase | EJI01_05675 | Not Available | Positive | 1177710 - 1178738 | 36919.2 |
| hypothetical protein | EJI01_05680 | Not Available | Negative | 1179214 - 1179918 | 25480.7 |
| hypothetical protein | EJI01_05685 | Not Available | Negative | 1180095 - 1180880 | 26630.5 |
| rna polymerase sigma factor | EJI01_05690 | Not Available | Negative | 1180877 - 1181398 | 19352.3 |
| peptidase s8/s53 subtilisin kexin sedolisin | EJI01_05695 | Not Available | Positive | 1181531 - 1182805 | 44057.9 |
| hypothetical protein | EJI01_05700 | Not Available | Positive | 1182873 - 1184201 | 44789.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
