Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. MHTC-1 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
968631 bp
Thymine Count
969319 bp
Guanine Count
1978850 bp
Cytosine Count
1966842 bp
Genome Length
5892341 bp
Protein-coding Genes
5482 genes
Non-Coding Genes
49 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| lysr family transcriptional regulator | EJI01_05600 | Not Available | Negative | 1161022 - 1161930 | 33202.8 |
| hydroxyquinol 1,2-dioxygenase | EJI01_05605 | Not Available | Positive | 1162038 - 1162925 | 32226.1 |
| citryl-coa lyase | EJI01_05610 | Not Available | Positive | 1162959 - 1163765 | 28050.4 |
| coa transferase | EJI01_05615 | Not Available | Positive | 1163762 - 1164928 | 42935.2 |
| abc transporter substrate-binding protein | EJI01_05625 | Not Available | Positive | 1165927 - 1167141 | 43452.3 |
| branched-chain amino acid abc transporter permease | EJI01_05630 | Not Available | Positive | 1167312 - 1168163 | 29686.4 |
| branched-chain amino acid abc transporter atp-binding protein/permease | EJI01_05635 | Not Available | Positive | 1168328 - 1170064 | 60980.2 |
| abc transporter atp-binding protein | EJI01_05640 | Not Available | Positive | 1170057 - 1170761 | 25213.1 |
| 5-methyltetrahydropteroyltriglutamate-- homocysteine methyltransferase | EJI01_05645 | Not Available | Positive | 1170784 - 1171809 | 37792.2 |
| hypothetical protein | EJI01_05650 | Not Available | Negative | 1172859 - 1173170 | 11609.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
