Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. MHTC-1 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
968631 bp
Thymine Count
969319 bp
Guanine Count
1978850 bp
Cytosine Count
1966842 bp
Genome Length
5892341 bp
Protein-coding Genes
5482 genes
Non-Coding Genes
49 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf899 domain-containing protein | EJI01_05545 | Not Available | Positive | 1150763 - 1151464 | 26436.4 |
| alpha/beta fold hydrolase | EJI01_05550 | Not Available | Negative | 1151474 - 1152235 | 26900.2 |
| hypothetical protein | EJI01_05555 | Not Available | Negative | 1152392 - 1152949 | 19764.2 |
| pas domain-containing sensor histidine kinase | EJI01_05560 | Not Available | Positive | 1153001 - 1154512 | 54796.5 |
| hypothetical protein | EJI01_05565 | Not Available | Negative | 1154525 - 1154761 | 8605.33 |
| hypothetical protein | EJI01_05570 | Not Available | Negative | 1154871 - 1155113 | 9059.17 |
| hypothetical protein | EJI01_05575 | Not Available | Positive | 1155220 - 1155450 | 8404.17 |
| redox-sensitive transcriptional activator soxr | EJI01_05580 | Not Available | Negative | 1155468 - 1155947 | 17477.1 |
| dmt family transporter | EJI01_05585 | Not Available | Positive | 1155925 - 1156950 | 36053.0 |
| hypothetical protein | EJI01_05595 | Not Available | Positive | 1160400 - 1161044 | 23902.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
