Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. MHTC-1 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
968631 bp
Thymine Count
969319 bp
Guanine Count
1978850 bp
Cytosine Count
1966842 bp
Genome Length
5892341 bp
Protein-coding Genes
5482 genes
Non-Coding Genes
49 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| extracellular solute-binding protein | EJI01_05495 | Not Available | Positive | 1141705 - 1143033 | 48440.3 |
| sugar abc transporter permease | EJI01_05500 | Not Available | Positive | 1143116 - 1143970 | 31547.0 |
| carbohydrate abc transporter permease | EJI01_05505 | Not Available | Positive | 1143967 - 1144848 | 32670.4 |
| pts sugar transporter subunit iia | EJI01_05510 | Not Available | Negative | 1144876 - 1145403 | 18605.1 |
| lysr family transcriptional regulator | EJI01_05515 | Not Available | Negative | 1145458 - 1146381 | 33865.2 |
| flavodoxin family protein | EJI01_05520 | Not Available | Positive | 1146449 - 1147234 | 28739.1 |
| hypothetical protein | EJI01_05525 | Not Available | Negative | 1147227 - 1147859 | 21304.5 |
| duf899 domain-containing protein | EJI01_05530 | Not Available | Negative | 1147879 - 1148649 | 29423.7 |
| hypothetical protein | EJI01_05535 | Not Available | Negative | 1148676 - 1149353 | 23878.8 |
| helix-turn-helix domain-containing protein | EJI01_05540 | Not Available | Negative | 1149399 - 1150619 | 42610.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
