Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. MHTC-1 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
968631 bp
Thymine Count
969319 bp
Guanine Count
1978850 bp
Cytosine Count
1966842 bp
Genome Length
5892341 bp
Protein-coding Genes
5482 genes
Non-Coding Genes
49 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 2-oxoacid:acceptor oxidoreductase subunit alpha | EJI01_05445 | Not Available | Positive | 1128159 - 1129976 | 66621.9 |
| 2-oxoacid:ferredoxin oxidoreductase subunit beta | EJI01_05450 | Not Available | Positive | 1129973 - 1131028 | 37500.7 |
| cbs domain-containing protein | EJI01_05455 | Not Available | Positive | 1131075 - 1131512 | 15756.3 |
| glycoside hydrolase | EJI01_05460 | Not Available | Negative | 1131530 - 1132714 | 44523.4 |
| gyd domain-containing protein | EJI01_05465 | Not Available | Positive | 1132930 - 1133256 | 11792.0 |
| adenylate cyclase | EJI01_05470 | Not Available | Negative | 1133253 - 1136636 | 121522.0 |
| dihydroxy-acid dehydratase | EJI01_05475 | Not Available | Negative | 1136825 - 1138642 | 65672.3 |
| nad-dependent epimerase/dehydratase family protein | EJI01_05480 | Not Available | Negative | 1138639 - 1139658 | 36005.3 |
| fadr family transcriptional regulator | EJI01_05485 | Not Available | Negative | 1139655 - 1140386 | 26609.1 |
| sn-glycerol-3-phosphate abc transporter atp-binding protein ugpc | EJI01_05490 | Not Available | Positive | 1140586 - 1141659 | 39134.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
