Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. MHTC-1 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
968631 bp
Thymine Count
969319 bp
Guanine Count
1978850 bp
Cytosine Count
1966842 bp
Genome Length
5892341 bp
Protein-coding Genes
5482 genes
Non-Coding Genes
49 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| translation initiation factor if-1 | EJI01_05090 | Not Available | Positive | 1065738 - 1066007 | 10091.2 |
| atp-dependent rna helicase dbpa | EJI01_05095 | Not Available | Positive | 1066007 - 1067416 | 50943.6 |
| hypothetical protein | EJI01_05100 | Not Available | Positive | 1067677 - 1067994 | 11798.0 |
| tetr/acrr family transcriptional regulator | EJI01_05105 | Not Available | Negative | 1067999 - 1068694 | 24825.4 |
| cytochrome c | EJI01_05110 | Not Available | Positive | 1068868 - 1069776 | 32005.8 |
| tripartite tricarboxylate transporter substrate binding protein | EJI01_05115 | Not Available | Negative | 1069805 - 1070803 | 34073.0 |
| amidohydrolase | EJI01_05120 | Not Available | Negative | 1070819 - 1072018 | 42912.2 |
| hypothetical protein | EJI01_05125 | Not Available | Positive | 1072119 - 1072307 | 7030.51 |
| plasmid stabilization protein | EJI01_05130 | Not Available | Negative | 1072329 - 1072640 | 10604.3 |
| hemerythrin domain-containing protein | EJI01_05135 | Not Available | Negative | 1072748 - 1073362 | 22604.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
