Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. MHTC-1 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
968631 bp
Thymine Count
969319 bp
Guanine Count
1978850 bp
Cytosine Count
1966842 bp
Genome Length
5892341 bp
Protein-coding Genes
5482 genes
Non-Coding Genes
49 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| sensor histidine kinase | EJI01_05035 | Not Available | Positive | 1054187 - 1055635 | 52654.6 |
| xre family transcriptional regulator | EJI01_05045 | Not Available | Negative | 1056052 - 1056324 | 10088.2 |
| xre family transcriptional regulator | EJI01_05050 | Not Available | Positive | 1056406 - 1057074 | 23634.5 |
| sporulation protein | EJI01_05055 | Not Available | Negative | 1057071 - 1057268 | 7219.96 |
| biotin--[acetyl-coa-carboxylase] ligase | EJI01_05060 | Not Available | Negative | 1057271 - 1058059 | 28150.9 |
| set domain-containing protein | EJI01_05065 | Not Available | Negative | 1058062 - 1058604 | 20233.0 |
| dna topoisomerase iii | EJI01_05070 | Not Available | Positive | 1058810 - 1061749 | 108505.0 |
| gamma-glutamyl-gamma-aminobutyrate hydrolase family protein | EJI01_05075 | Not Available | Negative | 1061973 - 1062854 | 32648.0 |
| sugar phosphate isomerase/epimerase | EJI01_05080 | Not Available | Positive | 1063022 - 1064077 | 39028.1 |
| serine protease | EJI01_05085 | Not Available | Negative | 1064164 - 1065225 | 37483.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
