Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. DXTD-1 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Variovorax sp. DXTD-1 93, whole genome shotgun sequence.
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
Not Available
Non-Coding Genes
Not Available
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| tonb-dependent receptor | EJI00_04270 | Not Available | Negative | 884810 - 886924 | 75559.5 |
| hypothetical protein | EJI00_04275 | Not Available | Negative | 887003 - 887422 | 14402.2 |
| peptide-methionine (s)-s-oxide reductase | EJI00_04280 | Not Available | Negative | 887447 - 887998 | 20305.8 |
| tetr/acrr family transcriptional regulator | EJI00_04285 | Not Available | Positive | 888100 - 888777 | 25464.8 |
| protein-l-isoaspartate o-methyltransferase | EJI00_04290 | Not Available | Positive | 888868 - 889545 | 24717.0 |
| sulfurtransferase | EJI00_04295 | Not Available | Positive | 889560 - 889898 | 12056.3 |
| channel protein tolc | EJI00_04300 | Not Available | Positive | 889920 - 891473 | 54818.2 |
| 3-deoxy-d-manno-octulosonic acid transferase | EJI00_04305 | Not Available | Negative | 891491 - 892870 | 49306.2 |
| phosphomannomutase/phosphoglucomutase | EJI00_04310 | Not Available | Negative | 892876 - 894258 | 48488.2 |
| dna-3-methyladenine glycosylase 2 family protein | EJI00_04315 | Not Available | Positive | 894370 - 895971 | 56782.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
