Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. DXTD-1 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Variovorax sp. DXTD-1 93, whole genome shotgun sequence.
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
Not Available
Non-Coding Genes
Not Available
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| prepilin-type n-terminal cleavage/methylation domain-containing protein | EJI00_00215 | Not Available | Negative | 52759 - 53442 | 24796.5 |
| type ii secretion system protein gspi | EJI00_00220 | Not Available | Negative | 53442 - 53816 | 13082.9 |
| type ii secretion system protein gsph | EJI00_00225 | Not Available | Negative | 53813 - 54280 | 15777.0 |
| type ii secretion system protein gspg | EJI00_00230 | Not Available | Negative | 54255 - 54695 | 15978.3 |
| hypothetical protein | EJI00_00235 | Not Available | Positive | 54745 - 55398 | 21631.8 |
| threonine ammonia-lyase, biosynthetic | EJI00_00240 | Not Available | Negative | 55411 - 57024 | 58237.6 |
| osmotically inducible protein c | EJI00_00245 | Not Available | Positive | 57314 - 57763 | 15798.0 |
| 2-polyprenyl-3-methyl-6-methoxy-1,4- benzoquinone monooxygenase | EJI00_00250 | Not Available | Negative | 57775 - 58404 | 22469.9 |
| porin | EJI00_00255 | Not Available | Positive | 58686 - 59879 | 42020.1 |
| abc transporter permease | EJI00_00260 | Not Available | Positive | 60071 - 61051 | 35999.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
