Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. DXTD-1 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Variovorax sp. DXTD-1 93, whole genome shotgun sequence.
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
Not Available
Non-Coding Genes
Not Available
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| pyridoxal phosphate-dependent aminotransferase | EJI00_02825 | Not Available | Positive | 611599 - 612774 | 42478.2 |
| duf3309 domain-containing protein | EJI00_02830 | Not Available | Positive | 612910 - 613068 | 5684.49 |
| atp-dependent rna helicase hrpa | EJI00_02835 | Not Available | Negative | 613132 - 617001 | 144164.0 |
| aaa family atpase | EJI00_02840 | Not Available | Positive | 617396 - 619390 | 73591.5 |
| amino-acid n-acetyltransferase | EJI00_02845 | Not Available | Positive | 619431 - 620777 | 49473.6 |
| lyse family translocator | EJI00_02850 | Not Available | Positive | 620801 - 621448 | 22320.8 |
| succinyldiaminopimelate transaminase | EJI00_02855 | Not Available | Positive | 621493 - 622713 | 44215.7 |
| 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate n-succinyltransferase | EJI00_02860 | Not Available | Positive | 622757 - 623590 | 29582.3 |
| pilt/pilu family type 4a pilus atpase | EJI00_02865 | Not Available | Positive | 623649 - 624797 | 42149.1 |
| succinyl-diaminopimelate desuccinylase | EJI00_02870 | Not Available | Positive | 624825 - 626000 | 41682.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
