Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. DXTD-1 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Variovorax sp. DXTD-1 93, whole genome shotgun sequence.
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
Not Available
Non-Coding Genes
Not Available
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 30s ribosomal protein s2 | EJI00_23070 | Not Available | Positive | 4864072 - 4864824 | 27488.3 |
| elongation factor ts | EJI00_23075 | Not Available | Positive | 4864906 - 4865829 | 32455.1 |
| ump kinase | EJI00_23080 | Not Available | Positive | 4865932 - 4866654 | 25436.0 |
| ribosome recycling factor | EJI00_23085 | Not Available | Positive | 4866666 - 4867235 | 20941.2 |
| di-trans,poly-cis-decaprenylcistransferase | EJI00_23090 | Not Available | Positive | 4867244 - 4867987 | 27249.6 |
| phosphatidate cytidylyltransferase | EJI00_23095 | Not Available | Positive | 4868017 - 4868862 | 30213.2 |
| 1-deoxy-d-xylulose-5-phosphate reductoisomerase | EJI00_23100 | Not Available | Positive | 4868859 - 4870046 | 41720.4 |
| rip metalloprotease rsep | EJI00_23105 | Not Available | Positive | 4870071 - 4871441 | 49477.6 |
| outer membrane protein assembly factor bama | EJI00_23110 | Not Available | Positive | 4871480 - 4873906 | 89691.8 |
| omph family outer membrane protein | EJI00_23115 | Not Available | Positive | 4873907 - 4874455 | 20430.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
