Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. DXTD-1 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Variovorax sp. DXTD-1 93, whole genome shotgun sequence.
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
Not Available
Non-Coding Genes
Not Available
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| response regulator transcription factor | EJI00_21615 | Not Available | Negative | 4540475 - 4541155 | 24778.3 |
| tripartite tricarboxylate transporter substrate binding protein | EJI00_21620 | Not Available | Positive | 4541287 - 4542246 | 32931.8 |
| tripartite tricarboxylate transporter tctb family protein | EJI00_21625 | Not Available | Positive | 4542351 - 4542887 | 18628.7 |
| tripartite tricarboxylate transporter permease | EJI00_21630 | Not Available | Positive | 4542889 - 4544406 | 52590.8 |
| efflux rnd transporter permease subunit | EJI00_21635 | Not Available | Negative | 4544807 - 4547917 | 111121.0 |
| efflux rnd transporter periplasmic adaptor subunit | EJI00_21640 | Not Available | Negative | 4547914 - 4549149 | 42323.5 |
| efflux transporter outer membrane subunit | EJI00_21645 | Not Available | Negative | 4549146 - 4550645 | 52137.1 |
| duf1956 domain-containing protein | EJI00_21650 | Not Available | Negative | 4550642 - 4551364 | 26298.7 |
| pas domain-containing protein | EJI00_21655 | Not Available | Positive | 4551522 - 4553075 | 56300.8 |
| abc transporter permease | EJI00_21660 | Not Available | Positive | 4553268 - 4554455 | 42480.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
