Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. DXTD-1 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Variovorax sp. DXTD-1 93, whole genome shotgun sequence.
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
Not Available
Non-Coding Genes
Not Available
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| type vi secretion system lipoprotein tssj | EJI00_21255 | Not Available | Negative | 4456086 - 4456598 | 18273.2 |
| type vi secretion system protein tssa | EJI00_21260 | Not Available | Positive | 4456670 - 4457701 | 36363.5 |
| type vi secretion system contractile sheath small subunit | EJI00_21265 | Not Available | Positive | 4457772 - 4458287 | 18631.4 |
| type vi secretion system contractile sheath large subunit | EJI00_21270 | Not Available | Positive | 4458329 - 4459822 | 55263.2 |
| type vi secretion system tube protein hcp | EJI00_21275 | Not Available | Positive | 4459965 - 4460447 | 17023.0 |
| hypothetical protein | EJI00_21280 | Not Available | Positive | 4460516 - 4461076 | 19952.3 |
| serine/threonine-protein phosphatase | EJI00_21285 | Not Available | Negative | 4461073 - 4461900 | 29363.5 |
| type vi secretion system-associated fha domain protein tagh | EJI00_21290 | Not Available | Negative | 4461957 - 4463624 | 57148.9 |
| tigr02270 family protein | EJI00_21295 | Not Available | Negative | 4463818 - 4466184 | 83459.7 |
| duf2169 domain-containing protein | EJI00_21300 | Not Available | Negative | 4466209 - 4467288 | 38582.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
